Publications

DARERL Technology have been verified and validated though several scientific publications.

2024

A systematic comparison between FEBio and PolyFEM for biomechanical systems, by Liam Martin, Pranav Jain, Zachary Ferguson, Torkan Gholamalizadeh, Faezeh Moshfeghifar, Kenny Erleben, Daniele Panozzo, Steven Abramowitch and Teseo Schneider. ,Computer Methods and Programs in Biomedicine. Volume 224 (2024). paper, publisher, DOI.

2023

	Deep-Learning-Based Segmentation of Individual Tooth and Bone With Periodontal Ligament Interface Details for Simulation Purposes, by Peidi Xu, Torkan Gholamalizadeh, Faezeh Moshfeghifar, Sune Darkner and Kenny Erleben. IEEE Access, Volume. 11, Pages 102460-102470 (2023). paper, code, publisher, DOI.
	Extremely weakly-supervised blood vessel segmentation with physiologically based synthesis and domain adaptation, by Peidi Xu, Olga Sosnovtseva, Charlotte Mehlin Sørensen, Kenny Erleben and Sune Darkner. Accepted for The 2nd Workshop of Medical Image Learning with Limited & Noisy Data (MILLanD) (2023). paper, code.
	A hybrid approach to full-scale reconstruction of renal arterial network, by Peidi Xu, Niels-Henrik Holstein-Rathlou, Stinne Byrholdt Søgaard, Carsten Gundlach, Charlotte Mehlin Sørensen, Kenny Erleben, Olga Sosnovtseva and Sune Darkner. Scientific Reports 13 (1), 7569 (2023). paper, code, publisher, DOI.

2022

	LibHip: An Open-Access Hip Joint Model Repository suitable for Finite Element Method Simulation, by Faezeh Moshfeghifar, Torkan Gholamalizadeh, Zachary Ferguson, Teseo Schneider, Michael Bachmann Nielsen, Daniele Panozzo, Sune Darkner and Kenny Erleben. Computer Methods and Programs in Biomedicine, 107140 (2022). paper, code, publisher, DOI.
	Accuracy and consistency of intensity-based deformable image registration in 4DCT for tumor motion estimation in liver radiotherapy planning, by José D. Tascón-Vidarte, Line Bjerregaard Stick, Mirjana Josipovic, Signe Risum, Julien Jomier, Kenny Erleben, Ivan Richter Vogelius and Sune Darkner. PLoS ONE, Volume 17, Number 7, e0271064, Pages 1-15 (2022). paper, publisher, DOI.
	Open-Full-Jaw: An open-access dataset and pipeline for finite element models of human jaw, by Torkan Gholamalizadeh, Faezeh Moshfeghifar, Zachary Ferguson, Teseo Schneider, Daniele Panozzo, Sune Darkner, Masrour Makaremi, François Chan, Peter Lampel Søndergaard and Kenny Erleben. Computer Methods and Programs in Biomedicine, Volume 224 (2022). paper, code, publisher, DOI.
	Auto-segmentation of Hip Joints using MultiPlanar UNet with Transfer learning, by Peidi Xu, Faezeh Moshfeghifar, Torkan Gholamalizadeh, Michael Bachmann Nielsen, Kenny Erleben and Sune Darkner. Medical Image Learning with Limited and Noisy Data. MILLanD 2022. Lecture Notes in Computer Science, vol 13559. Springer, Cham (2022). paper, code, publisher, DOI, ResearchGate.
	Pseudo-Label Guided Image Synthesis for Semi-Supervised COVID-19 Pneumonia Infection Segmentation, by Fei Lyu, Mang Ye, Jonathan Frederik Carlsen, Kenny Erleben, Sune Darkner and Pong C. Yuen. IEEE Transactions on Medical Imaging, 2022 (2022). paper, code, publisher, DOI.

2021

	Mandibular Teeth Movement Variations in Tipping Scenario: A Finite Element Study on Several Patients, by Torkan Gholamalizadeh, Sune Darkner, Paolo Maria Cattaneo, Peter Søndergaard and Kenny Erleben. Computational Biomechanics for Medicine, Pages 31-43. Springer, Cham (2021). paper, publisher, DOI.
	Contact modeling from images using cut finite element solvers, by Susanne Claus, Pierre Kerfriden, Faezeh Moshfeghifar, Sune Darkner, Kenny Erleben and Christian Wong. Advanced Modeling and Simulation in Engineering Sciences, Volume 8, Number 13 (2021). paper, publisher, DOI.
	A multi-patient analysis of the center of the rotation of the tooth using finite-element models for varying couple magnitudes and directions, by Torkan Gholamalizadeh, Sune Darkner, Peter Søndergaard and Kenny Erleben. PLoS ONE, Volume 16, Number 11 (2021). paper, data, publisher, DOI.
	A direct geometry processing cartilage generation method using segmented bone models from datasets with poor cartilage visibility, by Faezeh Moshfeghifar, Max Kragballle Nielsen, Jose D. Tascon-Vidarte, Sune Darkner and Kenny Erleben. Computational Biomechanics for Medicine XVI (2021). paper, code.
	Cine-MRI Simulation to Evaluate Tumor Tracking, by Jose David Tascon Vidarte, Isak Wahlstedt, Julien Jomier, Kenny Erleben, Ivan R. Vogelius and Sune Darkner. Simulation and Synthesis in Medical Imaging. SASHIMI 2021. Lecture Notes in Computer Science, vol 12965. Springer, Cham (2021). paper, publisher, DOI.